r/bioinformatics • • 4d ago

technical question Index error while using colabfold

I am using google colabfold for predicting my 936 amino acid long protein, but whenever I run it, its showing indexerror: list out of range. I have even tried to reduce the max_msa to 16:32 but its still showing the same error. Anybody has any idea on how to fix it?

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u/torontopeter 3d ago

Use the Alphafold3 server.

1

u/averageperson_69 3d ago

is it better than colabfold?